Faculty Directory
Rosemary Braun

Associate Professor of Molecular Biosciences and (by courtesy) Engineering Sciences and Applied Mathematics

Contact

3105 Pancoe
2200 Campus Dr
Chicago, IL 60208

312-503-3644 Email Rosemary Braun

Website

Feinberg Faculty Profile

Braun Lab Website

Departments

Engineering Sciences and Applied Mathematics

Education

M.P.H. Biostatistics, Johns Hopkins University

Ph.D. Physics, University of Illinois at Urbana-Champaign

Research Interests

I am a computational biologist with an interest in the development of methods for integrative, systems-level analysis of high-dimensional genomic and proteomic data. These methods incorporate bioinformatic information with experimental data to characterize the networks of interactions that lead to the emergence of complex phenotypes, particularly cancers.

Selected Publications

Systems analysis of high-throughput data
Braun R., Advances in Experimental Medicine and Biology. 2014 Jan;844:153-187.doi:10.1007/978-1-4939-2095-2_8.
ISSN: 00652598

Multi-SNP Analysis of GWAS Data Identifies Pathways Associated with Nonalcoholic Fatty Liver Disease
Chen Q-R, Braun R, Hu Y, Yan C, Brunt EM, Meerzaman D, Sanyal AJ, Buetow K.
PLoS ONE. 2013 Jul 19;8(7):doi:10.1371/journal.pone.0065982.
PMID: 23894275 PMCID: PMC3716806 ISSN: 19326203

Discovery Analysis of TCGA Data Reveals Association between Germline Genotype and Survival in Ovarian Cancer Patients
Braun R, Finney R, Yan C, Chen Q-R, Hu Y, Edmonson M, Meerzaman D, Buetow K.
PLoS ONE. 2013 Mar 21;8(3):doi:10.1371/journal.pone.0055037.
PMID: 23555554 PMCID: PMC3605427 ISSN: 19326203

Partition decoupling for multi-gene analysis of gene expression profiling data
Braun R, Leibon G, Pauls S, Rockmore D.
BMC Bioinformatics. 2011 Dec 30;12(1):doi:10.1186/1471-2105-12-497.
PMID: 22208906 PMCID: PMC3276603 ISSN: 14712105

Pathways of distinction analysis: A new technique for multi-SNP analysis of GWAS data
Braun R, Buetow K.
PLoS Genetics. 2011 Jun;7(6):doi:10.1371/journal.pgen.1002101.
PMID: 21695280 PMCID: PMC3111473 ISSN: 15537390

MicroRNA expression in squamous cell carcinoma and adenocarcinoma of the esophagus: Associations with survival
Mathé EA, Giang HN, Bowman ED, Zhao Y, Budhu A, Schetter AJ, Braun R, Reimers M, Kumamoto K, Hughes D, Altorki N, Casson AG, Liu C-G, Xin WW, Yanaihara N, Hagiwara N, Dannenberg AJ, Miyashita M, Croce CM, Harris CC.
Clinical Cancer Research. 2009 Oct;15(19):6192-6200.doi:10.1158/1078-0432.CCR-09-1467.
19789312 PMCID: PMC2933109 ISSN: 10780432